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A buch of changes (hot fixes) to ensure nipype 1.0 compatibility#305

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bthirion wants to merge 1 commit intoneurospin:masterfrom
bthirion:nipype-1.0
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A buch of changes (hot fixes) to ensure nipype 1.0 compatibility#305
bthirion wants to merge 1 commit intoneurospin:masterfrom
bthirion:nipype-1.0

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@bthirion bthirion commented Apr 4, 2018

A bunch of changes that are necessary for pypreprocess to work with nipype 1.0

'and "use_mcr" to True'.format(spm_mcr))
spm.SPMCommand.set_mlab_paths(
matlab_cmd='{} run script'.format(spm_mcr), use_mcr=True)
matlab_cmd='{} batch'.format(spm_mcr), use_mcr=True)
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Good catch on this. They have deprecated using "run" from recent standalone versions for SPM12. More details on this can be found here https://github.com/spm/spm12/blob/master/spm_standalone.m

I am wandering whether this might again get into script running errors when users fall back to slightly older standalone versions ?

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